Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdkn2bP55271 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdkn2bP55271 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cdkn2bP55271 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdkn2bP55271 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdkn2bP55271 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Cdkn2bP55271 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdkn2bP55271 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdkn2bP55271 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.33□□□□□ -0.28
Cdkn2bP55271 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cdkn2bP55271 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.32□□□□□ -0.28
Cdkn2bP55271 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.32□□□□□ -0.28
Cdkn2bP55271 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.32□□□□□ -0.28
Cdkn2bP55271 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cdkn2bP55271 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Gm13015-201ENSMUST00000118674 204 ntBASIC13.31□□□□□ -0.28
Cdkn2bP55271 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Gm27631-201ENSMUST00000184163 466 ntBASIC13.31□□□□□ -0.28
Cdkn2bP55271 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.31□□□□□ -0.28
Cdkn2bP55271 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Mir125a-201ENSMUST00000083545 68 ntBASIC13.31□□□□□ -0.28
Cdkn2bP55271 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.31□□□□□ -0.28
Cdkn2bP55271 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdkn2bP55271 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdkn2bP55271 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdkn2bP55271 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdkn2bP55271 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdkn2bP55271 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Cdkn2bP55271 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdkn2bP55271 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdkn2bP55271 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdkn2bP55271 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdkn2bP55271 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdkn2bP55271 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Cdkn2bP55271 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdkn2bP55271 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms