Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hnf4aP49698 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hnf4aP49698 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hnf4aP49698 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hnf4aP49698 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hnf4aP49698 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.5□□□□□ -0.25
Hnf4aP49698 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hnf4aP49698 Gm24543-201ENSMUST00000103867 82 ntBASIC13.5□□□□□ -0.25
Hnf4aP49698 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hnf4aP49698 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hnf4aP49698 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hnf4aP49698 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.5□□□□□ -0.25
Hnf4aP49698 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.5□□□□□ -0.25
Hnf4aP49698 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Hnf4aP49698 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hnf4aP49698 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.5□□□□□ -0.25
Hnf4aP49698 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hnf4aP49698 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hnf4aP49698 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.5□□□□□ -0.25
Hnf4aP49698 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hnf4aP49698 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hnf4aP49698 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hnf4aP49698 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hnf4aP49698 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hnf4aP49698 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.5□□□□□ -0.25
Hnf4aP49698 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hnf4aP49698 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Hnf4aP49698 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hnf4aP49698 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Hnf4aP49698 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hnf4aP49698 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hnf4aP49698 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hnf4aP49698 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.49□□□□□ -0.25
Hnf4aP49698 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Hnf4aP49698 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.49□□□□□ -0.25
Hnf4aP49698 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.49□□□□□ -0.25
Hnf4aP49698 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Hnf4aP49698 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.49□□□□□ -0.25
Hnf4aP49698 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Gm6415-201ENSMUST00000118488 348 ntBASIC13.49□□□□□ -0.25
Hnf4aP49698 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.49□□□□□ -0.25
Hnf4aP49698 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Gm28630-201ENSMUST00000187806 498 ntBASIC13.49□□□□□ -0.25
Hnf4aP49698 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.49□□□□□ -0.25
Hnf4aP49698 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.49□□□□□ -0.25
Hnf4aP49698 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Hnf4aP49698 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.49□□□□□ -0.25
Hnf4aP49698 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hnf4aP49698 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hnf4aP49698 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Hnf4aP49698 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hnf4aP49698 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hnf4aP49698 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Hnf4aP49698 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hnf4aP49698 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hnf4aP49698 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hnf4aP49698 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hnf4aP49698 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hnf4aP49698 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Hnf4aP49698 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hnf4aP49698 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hnf4aP49698 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hnf4aP49698 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hnf4aP49698 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.48□□□□□ -0.25
Hnf4aP49698 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hnf4aP49698 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.48□□□□□ -0.25
Hnf4aP49698 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hnf4aP49698 Gm18027-201ENSMUST00000218947 619 ntBASIC13.48□□□□□ -0.25
Hnf4aP49698 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Hnf4aP49698 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Hnf4aP49698 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms