Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Thbs1P35441 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.88□□□□□ -0.35
Thbs1P35441 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Thbs1P35441 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Thbs1P35441 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Thbs1P35441 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Thbs1P35441 Gm6415-201ENSMUST00000118488 348 ntBASIC12.88□□□□□ -0.35
Thbs1P35441 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Thbs1P35441 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.88□□□□□ -0.35
Thbs1P35441 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.88□□□□□ -0.35
Thbs1P35441 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Gm6916-202ENSMUST00000205523 195 ntBASIC12.88□□□□□ -0.35
Thbs1P35441 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Thbs1P35441 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Thbs1P35441 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Thbs1P35441 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Thbs1P35441 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Thbs1P35441 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Thbs1P35441 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Thbs1P35441 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Thbs1P35441 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.87□□□□□ -0.35
Thbs1P35441 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.87□□□□□ -0.35
Thbs1P35441 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.87□□□□□ -0.35
Thbs1P35441 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.87□□□□□ -0.35
Thbs1P35441 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Gm44044-201ENSMUST00000205178 1089 ntBASIC12.87□□□□□ -0.35
Thbs1P35441 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.87□□□□□ -0.35
Thbs1P35441 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.87□□□□□ -0.35
Thbs1P35441 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.87□□□□□ -0.35
Thbs1P35441 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.87□□□□□ -0.35
Thbs1P35441 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.87□□□□□ -0.35
Thbs1P35441 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.87□□□□□ -0.35
Thbs1P35441 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Thbs1P35441 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Thbs1P35441 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs1P35441 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.86□□□□□ -0.35
Thbs1P35441 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Thbs1P35441 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.86□□□□□ -0.35
Thbs1P35441 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs1P35441 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs1P35441 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs1P35441 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs1P35441 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs1P35441 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs1P35441 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs1P35441 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs1P35441 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs1P35441 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.86□□□□□ -0.35
Thbs1P35441 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thbs1P35441 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.86□□□□□ -0.35
Thbs1P35441 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms