Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf1aP25118 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf1aP25118 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf1aP25118 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.67□□□□□ -0.54
Tnfrsf1aP25118 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf1aP25118 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Gm4995-201ENSMUST00000117247 432 ntBASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Gm14822-201ENSMUST00000122247 291 ntBASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf1aP25118 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Gm24158-201ENSMUST00000175263 71 ntBASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Gm44335-201ENSMUST00000196879 141 ntBASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Gm44297-201ENSMUST00000198304 141 ntBASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Gm44346-201ENSMUST00000198851 141 ntBASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Gm45453-201ENSMUST00000211758 853 ntBASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf1aP25118 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
Tnfrsf1aP25118 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.65□□□□□ -0.55
Tnfrsf1aP25118 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf1aP25118 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Tnfrsf1aP25118 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Tnfrsf1aP25118 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Tnfrsf1aP25118 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1aP25118 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1aP25118 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1aP25118 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1aP25118 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1aP25118 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1aP25118 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1aP25118 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1aP25118 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1aP25118 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf1aP25118 Gm23935-201ENSMUST00000102303 57 ntBASIC11.64□□□□□ -0.55
Tnfrsf1aP25118 Gm24270-201ENSMUST00000102326 57 ntBASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms