Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
PdgfrbP05622 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PdgfrbP05622 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
PdgfrbP05622 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.07□□□□□ -0.16
PdgfrbP05622 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PdgfrbP05622 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PdgfrbP05622 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PdgfrbP05622 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Gm13453-201ENSMUST00000118708 357 ntBASIC14.07□□□□□ -0.16
PdgfrbP05622 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.07□□□□□ -0.16
PdgfrbP05622 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.07□□□□□ -0.16
PdgfrbP05622 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.07□□□□□ -0.16
PdgfrbP05622 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PdgfrbP05622 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.07□□□□□ -0.16
PdgfrbP05622 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.07□□□□□ -0.16
PdgfrbP05622 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfrbP05622 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.06□□□□□ -0.16
PdgfrbP05622 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PdgfrbP05622 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.06□□□□□ -0.16
PdgfrbP05622 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PdgfrbP05622 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PdgfrbP05622 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PdgfrbP05622 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
PdgfrbP05622 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
PdgfrbP05622 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Gm27680-201ENSMUST00000184192 160 ntBASIC14.06□□□□□ -0.16
PdgfrbP05622 Gm43703-201ENSMUST00000200523 763 ntBASIC14.06□□□□□ -0.16
PdgfrbP05622 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
PdgfrbP05622 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.06□□□□□ -0.16
PdgfrbP05622 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.06□□□□□ -0.16
PdgfrbP05622 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.06□□□□□ -0.16
PdgfrbP05622 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.06□□□□□ -0.16
PdgfrbP05622 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PdgfrbP05622 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfrbP05622 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfrbP05622 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfrbP05622 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfrbP05622 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PdgfrbP05622 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfrbP05622 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfrbP05622 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfrbP05622 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
PdgfrbP05622 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfrbP05622 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms