Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim55G3X8Y1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim55G3X8Y1 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.27□□□□□ -0.13
Trim55G3X8Y1 Gm6623-201ENSMUST00000173570 544 ntBASIC14.27□□□□□ -0.13
Trim55G3X8Y1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trim55G3X8Y1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim55G3X8Y1 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim55G3X8Y1 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim55G3X8Y1 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trim55G3X8Y1 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim55G3X8Y1 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim55G3X8Y1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim55G3X8Y1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim55G3X8Y1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim55G3X8Y1 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim55G3X8Y1 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trim55G3X8Y1 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Gm9172-201ENSMUST00000212092 954 ntBASIC14.26□□□□□ -0.13
Trim55G3X8Y1 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim55G3X8Y1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim55G3X8Y1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim55G3X8Y1 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms