Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
ScaperF8VQ70 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.62■□□□□ 0.41
ScaperF8VQ70 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ScaperF8VQ70 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.62■□□□□ 0.41
ScaperF8VQ70 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.62■□□□□ 0.41
ScaperF8VQ70 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ScaperF8VQ70 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ScaperF8VQ70 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ScaperF8VQ70 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ScaperF8VQ70 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ScaperF8VQ70 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ScaperF8VQ70 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ScaperF8VQ70 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ScaperF8VQ70 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ScaperF8VQ70 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ScaperF8VQ70 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ScaperF8VQ70 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ScaperF8VQ70 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ScaperF8VQ70 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ScaperF8VQ70 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.61■□□□□ 0.41
ScaperF8VQ70 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.61■□□□□ 0.41
ScaperF8VQ70 Gm15429-201ENSMUST00000151268 798 ntBASIC17.61■□□□□ 0.41
ScaperF8VQ70 Gm27847-201ENSMUST00000183711 107 ntBASIC17.61■□□□□ 0.41
ScaperF8VQ70 Gm27375-201ENSMUST00000183799 107 ntBASIC17.61■□□□□ 0.41
ScaperF8VQ70 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.61■□□□□ 0.41
ScaperF8VQ70 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC17.61■□□□□ 0.41
ScaperF8VQ70 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.61■□□□□ 0.41
ScaperF8VQ70 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ScaperF8VQ70 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ScaperF8VQ70 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ScaperF8VQ70 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
ScaperF8VQ70 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.6■□□□□ 0.41
ScaperF8VQ70 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.6■□□□□ 0.41
ScaperF8VQ70 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Mir3102-201ENSMUST00000175555 104 ntBASIC17.6■□□□□ 0.41
ScaperF8VQ70 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.6■□□□□ 0.41
ScaperF8VQ70 CT025610.1-201ENSMUST00000224552 1786 ntBASIC17.6■□□□□ 0.41
ScaperF8VQ70 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.6■□□□□ 0.41
ScaperF8VQ70 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ScaperF8VQ70 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ScaperF8VQ70 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.59■□□□□ 0.41
ScaperF8VQ70 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ScaperF8VQ70 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.59■□□□□ 0.41
ScaperF8VQ70 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ScaperF8VQ70 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.59■□□□□ 0.41
ScaperF8VQ70 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ScaperF8VQ70 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ScaperF8VQ70 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ScaperF8VQ70 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ScaperF8VQ70 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ScaperF8VQ70 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ScaperF8VQ70 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ScaperF8VQ70 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17.59■□□□□ 0.41
ScaperF8VQ70 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.59■□□□□ 0.41
ScaperF8VQ70 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ScaperF8VQ70 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.59■□□□□ 0.41
ScaperF8VQ70 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ScaperF8VQ70 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms