Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
R3hdm1E9Q9Q2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm1E9Q9Q2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm1E9Q9Q2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm1E9Q9Q2 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.35■□□□□ 0.05
R3hdm1E9Q9Q2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm1E9Q9Q2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm1E9Q9Q2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm1E9Q9Q2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
R3hdm1E9Q9Q2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Gm17795-201ENSMUST00000214505 757 ntBASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
R3hdm1E9Q9Q2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.33■□□□□ 0.05
R3hdm1E9Q9Q2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
R3hdm1E9Q9Q2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.33■□□□□ 0.05
R3hdm1E9Q9Q2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
R3hdm1E9Q9Q2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
R3hdm1E9Q9Q2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
R3hdm1E9Q9Q2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
R3hdm1E9Q9Q2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
R3hdm1E9Q9Q2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
R3hdm1E9Q9Q2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
R3hdm1E9Q9Q2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
R3hdm1E9Q9Q2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
R3hdm1E9Q9Q2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
R3hdm1E9Q9Q2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
R3hdm1E9Q9Q2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms