Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Gm16198-201ENSMUST00000118766 670 ntBASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Gm2272-201ENSMUST00000194903 582 ntBASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Gm11127A7VMS2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Gm11127A7VMS2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Gm11127A7VMS2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Gm8749-201ENSMUST00000117737 331 ntBASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Gm14140-201ENSMUST00000119999 995 ntBASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Thap2-203ENSMUST00000218989 527 ntBASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.33□□□□□ -0.44
Gm11127A7VMS2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm11127A7VMS2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm11127A7VMS2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Gm11127A7VMS2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm11127A7VMS2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm11127A7VMS2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm11127A7VMS2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm11127A7VMS2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Gm11127A7VMS2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm11127A7VMS2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gm11127A7VMS2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm11127A7VMS2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm11127A7VMS2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Gm11127A7VMS2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Gm11127A7VMS2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.32□□□□□ -0.44
Gm11127A7VMS2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Gm11127A7VMS2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm11127A7VMS2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm11127A7VMS2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gm11127A7VMS2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms