Protein–RNA interactions for Protein: Q9D289

Trappc6b, Trafficking protein particle complex subunit 6B, mousemouse

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6bQ9D289 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Rpph1-201ENSMUST00000175096 319 ntBASIC12.18□□□□□ -0.46
Trappc6bQ9D289 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.18□□□□□ -0.46
Trappc6bQ9D289 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Gm10175-201ENSMUST00000086013 645 ntBASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trappc6bQ9D289 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Gm14822-201ENSMUST00000122247 291 ntBASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Gm27397-201ENSMUST00000184997 107 ntBASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.17□□□□□ -0.46
Trappc6bQ9D289 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trappc6bQ9D289 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Rprl2-201ENSMUST00000157150 290 ntBASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Gm24513-201ENSMUST00000174964 138 ntBASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.16□□□□□ -0.46
Trappc6bQ9D289 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms