Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rab11fip3Q8CHD8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 AC110817.1-201ENSMUST00000225706 605 ntBASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.98■□□□□ 0.47
Rab11fip3Q8CHD8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Gm15824-201ENSMUST00000119516 955 ntBASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rab11fip3Q8CHD8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Gm12928-201ENSMUST00000117115 573 ntBASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Gm13829-201ENSMUST00000119600 138 ntBASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Gm44397-201ENSMUST00000195950 113 ntBASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Gm7287-201ENSMUST00000205267 602 ntBASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rab11fip3Q8CHD8 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rab11fip3Q8CHD8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rab11fip3Q8CHD8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rab11fip3Q8CHD8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC17.96■□□□□ 0.46
Rab11fip3Q8CHD8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rab11fip3Q8CHD8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip3Q8CHD8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip3Q8CHD8 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip3Q8CHD8 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rab11fip3Q8CHD8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip3Q8CHD8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip3Q8CHD8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip3Q8CHD8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip3Q8CHD8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip3Q8CHD8 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.95■□□□□ 0.46
Rab11fip3Q8CHD8 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip3Q8CHD8 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rab11fip3Q8CHD8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Rab11fip3Q8CHD8 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms