Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Gm10499-201ENSMUST00000174094 934 ntBASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tsen54Q8C2A2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tsen54Q8C2A2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms