Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Gm28630-201ENSMUST00000187806 498 ntBASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Mir125a-201ENSMUST00000083545 68 ntBASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ppp4r4Q8C0Y0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Gm5566-201ENSMUST00000116118 459 ntBASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Gm15920-201ENSMUST00000118998 402 ntBASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Gm45453-201ENSMUST00000211758 853 ntBASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ppp4r4Q8C0Y0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Gm15693-201ENSMUST00000120470 637 ntBASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Gm10275-202ENSMUST00000168697 495 ntBASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Dupd1-202ENSMUST00000224735 548 ntBASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Gm10275-201ENSMUST00000092620 635 ntBASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ppp4r4Q8C0Y0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ppp4r4Q8C0Y0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ppp4r4Q8C0Y0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ppp4r4Q8C0Y0 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ppp4r4Q8C0Y0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ppp4r4Q8C0Y0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ppp4r4Q8C0Y0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ppp4r4Q8C0Y0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ppp4r4Q8C0Y0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ppp4r4Q8C0Y0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ppp4r4Q8C0Y0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ppp4r4Q8C0Y0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Ppp4r4Q8C0Y0 Gm13223-201ENSMUST00000118609 747 ntBASIC14.1□□□□□ -0.15
Ppp4r4Q8C0Y0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ppp4r4Q8C0Y0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms