Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Gm45384-201ENSMUST00000210451 277 ntBASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh8Q7TSK3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Gm18624-201ENSMUST00000220966 658 ntBASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh8Q7TSK3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Gm14127-201ENSMUST00000117906 678 ntBASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.74□□□□□ -0.21
Pcdh8Q7TSK3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms