Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.33■□□□□ 0.2
Krt40Q6IFX3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt40Q6IFX3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Krt40Q6IFX3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt40Q6IFX3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt40Q6IFX3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt40Q6IFX3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Krt40Q6IFX3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Krt40Q6IFX3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt40Q6IFX3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt40Q6IFX3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Krt40Q6IFX3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Gm44397-201ENSMUST00000195950 113 ntBASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Gm7287-201ENSMUST00000205267 602 ntBASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Gm44719-201ENSMUST00000206404 149 ntBASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Krt40Q6IFX3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Gm13829-201ENSMUST00000119600 138 ntBASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Krt40Q6IFX3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Gm17330-201ENSMUST00000221047 165 ntBASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Krt40Q6IFX3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms