Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Gm26315-201ENSMUST00000083890 321 ntBASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Gm24447-201ENSMUST00000083977 338 ntBASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Gm14726-201ENSMUST00000120623 896 ntBASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Vps13aQ5H8C4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps13aQ5H8C4 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Gm24420-201ENSMUST00000176676 59 ntBASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Gm14665-201ENSMUST00000122294 557 ntBASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.49□□□□□ -0.25
Vps13aQ5H8C4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms