Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gabpb1Q00420 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Gabpb1Q00420 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabpb1Q00420 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabpb1Q00420 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Gabpb1Q00420 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.16□□□□□ -0.14
Gabpb1Q00420 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabpb1Q00420 Gm15460-201ENSMUST00000118147 391 ntBASIC14.16□□□□□ -0.14
Gabpb1Q00420 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.16□□□□□ -0.14
Gabpb1Q00420 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.16□□□□□ -0.14
Gabpb1Q00420 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gabpb1Q00420 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.16□□□□□ -0.14
Gabpb1Q00420 Gm9229-201ENSMUST00000222777 126 ntBASIC14.16□□□□□ -0.14
Gabpb1Q00420 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabpb1Q00420 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.16□□□□□ -0.14
Gabpb1Q00420 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabpb1Q00420 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gabpb1Q00420 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabpb1Q00420 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabpb1Q00420 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabpb1Q00420 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabpb1Q00420 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gabpb1Q00420 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabpb1Q00420 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabpb1Q00420 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabpb1Q00420 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabpb1Q00420 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gabpb1Q00420 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.15□□□□□ -0.14
Gabpb1Q00420 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.15□□□□□ -0.14
Gabpb1Q00420 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Gm25948-201ENSMUST00000175334 112 ntBASIC14.15□□□□□ -0.14
Gabpb1Q00420 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.15□□□□□ -0.14
Gabpb1Q00420 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.15□□□□□ -0.14
Gabpb1Q00420 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gabpb1Q00420 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Gabpb1Q00420 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Gabpb1Q00420 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Gabpb1Q00420 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.14□□□□□ -0.15
Gabpb1Q00420 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
Gabpb1Q00420 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms