Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.36□□□□□ -0.27
Cdh4P39038 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh4P39038 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh4P39038 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh4P39038 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdh4P39038 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdh4P39038 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Cdh4P39038 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cdh4P39038 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdh4P39038 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Gm21470-201ENSMUST00000187680 696 ntBASIC13.35□□□□□ -0.27
Cdh4P39038 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.35□□□□□ -0.27
Cdh4P39038 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.35□□□□□ -0.27
Cdh4P39038 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cdh4P39038 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdh4P39038 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdh4P39038 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdh4P39038 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdh4P39038 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdh4P39038 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdh4P39038 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cdh4P39038 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cdh4P39038 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdh4P39038 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.34□□□□□ -0.27
Cdh4P39038 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Gm14719-201ENSMUST00000121891 340 ntBASIC13.34□□□□□ -0.27
Cdh4P39038 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cdh4P39038 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cdh4P39038 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.34□□□□□ -0.27
Cdh4P39038 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cdh4P39038 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdh4P39038 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdh4P39038 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdh4P39038 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.34□□□□□ -0.27
Cdh4P39038 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cdh4P39038 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdh4P39038 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdh4P39038 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdh4P39038 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.33□□□□□ -0.27
Cdh4P39038 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Cdh4P39038 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Cdh4P39038 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
Cdh4P39038 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdh4P39038 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh4P39038 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh4P39038 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cdh4P39038 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.33□□□□□ -0.28
Cdh4P39038 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cdh4P39038 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cdh4P39038 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cdh4P39038 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Cdh4P39038 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms