Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk2P38575 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk2P38575 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
Upk2P38575 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Upk2P38575 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk2P38575 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Upk2P38575 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.24□□□□□ -0.45
Upk2P38575 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk2P38575 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Upk2P38575 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk2P38575 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.23□□□□□ -0.45
Upk2P38575 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Upk2P38575 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Upk2P38575 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Upk2P38575 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Upk2P38575 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Upk2P38575 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Gm27618-201ENSMUST00000183671 60 ntBASIC12.23□□□□□ -0.45
Upk2P38575 Gm21470-201ENSMUST00000187680 696 ntBASIC12.23□□□□□ -0.45
Upk2P38575 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.23□□□□□ -0.45
Upk2P38575 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Upk2P38575 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.23□□□□□ -0.45
Upk2P38575 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Upk2P38575 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk2P38575 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Upk2P38575 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Upk2P38575 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Upk2P38575 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.22□□□□□ -0.45
Upk2P38575 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Upk2P38575 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.22□□□□□ -0.45
Upk2P38575 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.22□□□□□ -0.45
Upk2P38575 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Upk2P38575 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.22□□□□□ -0.45
Upk2P38575 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Upk2P38575 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Upk2P38575 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Upk2P38575 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk2P38575 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk2P38575 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk2P38575 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk2P38575 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk2P38575 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk2P38575 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk2P38575 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms