Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ApoeP08226 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.2□□□□□ -0.3
ApoeP08226 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ApoeP08226 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ApoeP08226 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.2□□□□□ -0.3
ApoeP08226 Gm27920-201ENSMUST00000183953 96 ntBASIC13.2□□□□□ -0.3
ApoeP08226 Gm27628-201ENSMUST00000184911 107 ntBASIC13.2□□□□□ -0.3
ApoeP08226 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.2□□□□□ -0.3
ApoeP08226 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.2□□□□□ -0.3
ApoeP08226 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ApoeP08226 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ApoeP08226 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.2□□□□□ -0.3
ApoeP08226 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
ApoeP08226 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.19□□□□□ -0.3
ApoeP08226 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ApoeP08226 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
ApoeP08226 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ApoeP08226 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ApoeP08226 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.19□□□□□ -0.3
ApoeP08226 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.19□□□□□ -0.3
ApoeP08226 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.19□□□□□ -0.3
ApoeP08226 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
ApoeP08226 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ApoeP08226 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ApoeP08226 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
ApoeP08226 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ApoeP08226 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ApoeP08226 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ApoeP08226 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ApoeP08226 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ApoeP08226 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ApoeP08226 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ApoeP08226 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ApoeP08226 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
ApoeP08226 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ApoeP08226 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ApoeP08226 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ApoeP08226 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ApoeP08226 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ApoeP08226 Gm24589-201ENSMUST00000116692 94 ntBASIC13.18□□□□□ -0.3
ApoeP08226 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.18□□□□□ -0.3
ApoeP08226 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ApoeP08226 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ApoeP08226 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.18□□□□□ -0.3
ApoeP08226 Gm7461-201ENSMUST00000058918 827 ntBASIC13.18□□□□□ -0.3
ApoeP08226 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ApoeP08226 Gm15590-201ENSMUST00000078419 552 ntBASIC13.18□□□□□ -0.3
ApoeP08226 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ApoeP08226 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.18□□□□□ -0.3
ApoeP08226 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ApoeP08226 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ApoeP08226 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ApoeP08226 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ApoeP08226 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ApoeP08226 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
ApoeP08226 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ApoeP08226 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ApoeP08226 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ApoeP08226 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ApoeP08226 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ApoeP08226 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms