Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubr1O70481 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubr1O70481 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubr1O70481 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ubr1O70481 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ubr1O70481 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.76■□□□□ 0.43
Ubr1O70481 Gm11637-201ENSMUST00000120601 592 ntBASIC17.76■□□□□ 0.43
Ubr1O70481 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC17.76■□□□□ 0.43
Ubr1O70481 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC17.76■□□□□ 0.43
Ubr1O70481 Gm43822-201ENSMUST00000200285 476 ntBASIC17.76■□□□□ 0.43
Ubr1O70481 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC17.76■□□□□ 0.43
Ubr1O70481 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC17.76■□□□□ 0.43
Ubr1O70481 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC17.76■□□□□ 0.43
Ubr1O70481 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.76■□□□□ 0.43
Ubr1O70481 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ubr1O70481 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC17.75■□□□□ 0.43
Ubr1O70481 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ubr1O70481 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ubr1O70481 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubr1O70481 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ubr1O70481 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ubr1O70481 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubr1O70481 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ubr1O70481 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubr1O70481 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC17.75■□□□□ 0.43
Ubr1O70481 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Ubr1O70481 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubr1O70481 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubr1O70481 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ubr1O70481 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Ubr1O70481 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.74■□□□□ 0.43
Ubr1O70481 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC17.74■□□□□ 0.43
Ubr1O70481 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.74■□□□□ 0.43
Ubr1O70481 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC17.74■□□□□ 0.43
Ubr1O70481 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC17.74■□□□□ 0.43
Ubr1O70481 Gm11591-201ENSMUST00000120063 702 ntBASIC17.74■□□□□ 0.43
Ubr1O70481 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Ubr1O70481 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC17.74■□□□□ 0.43
Ubr1O70481 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC17.74■□□□□ 0.43
Ubr1O70481 Gm7895-201ENSMUST00000187459 1173 ntBASIC17.74■□□□□ 0.43
Ubr1O70481 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ubr1O70481 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.74■□□□□ 0.43
Ubr1O70481 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ubr1O70481 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubr1O70481 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubr1O70481 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubr1O70481 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubr1O70481 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubr1O70481 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubr1O70481 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ubr1O70481 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ubr1O70481 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ubr1O70481 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC17.73■□□□□ 0.43
Ubr1O70481 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC17.73■□□□□ 0.43
Ubr1O70481 AC022775.2-201ENSMUST00000227885 646 ntBASIC17.73■□□□□ 0.43
Ubr1O70481 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ubr1O70481 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubr1O70481 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubr1O70481 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubr1O70481 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ubr1O70481 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ubr1O70481 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC17.72■□□□□ 0.43
Ubr1O70481 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ubr1O70481 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubr1O70481 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ubr1O70481 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubr1O70481 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ubr1O70481 Gm38266-201ENSMUST00000194931 421 ntBASIC17.72■□□□□ 0.43
Ubr1O70481 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC17.72■□□□□ 0.43
Ubr1O70481 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC17.72■□□□□ 0.43
Ubr1O70481 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubr1O70481 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubr1O70481 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubr1O70481 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC17.72■□□□□ 0.43
Ubr1O70481 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubr1O70481 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubr1O70481 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.72■□□□□ 0.43
Ubr1O70481 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ubr1O70481 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms