Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC17.67■□□□□ 0.42
Col15a1O35206 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 Gm38266-201ENSMUST00000194931 421 ntBASIC17.67■□□□□ 0.42
Col15a1O35206 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 Olfr284-202ENSMUST00000206647 966 ntBASIC17.67■□□□□ 0.42
Col15a1O35206 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Col15a1O35206 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Col15a1O35206 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Col15a1O35206 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Col15a1O35206 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Col15a1O35206 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col15a1O35206 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col15a1O35206 Gm15236-201ENSMUST00000117309 379 ntBASIC17.66■□□□□ 0.42
Col15a1O35206 Gm13342-201ENSMUST00000121055 207 ntBASIC17.66■□□□□ 0.42
Col15a1O35206 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC17.66■□□□□ 0.42
Col15a1O35206 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC17.66■□□□□ 0.42
Col15a1O35206 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC17.66■□□□□ 0.42
Col15a1O35206 Cts7-204ENSMUST00000225321 1257 ntBASIC17.66■□□□□ 0.42
Col15a1O35206 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col15a1O35206 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col15a1O35206 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Col15a1O35206 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Col15a1O35206 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col15a1O35206 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Col15a1O35206 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col15a1O35206 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col15a1O35206 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col15a1O35206 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
Col15a1O35206 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC17.66■□□□□ 0.42
Col15a1O35206 Gm18630-201ENSMUST00000222109 1397 ntBASIC17.66■□□□□ 0.42
Col15a1O35206 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col15a1O35206 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col15a1O35206 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Col15a1O35206 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col15a1O35206 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col15a1O35206 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col15a1O35206 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.66■□□□□ 0.42
Col15a1O35206 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Col15a1O35206 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Col15a1O35206 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col15a1O35206 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col15a1O35206 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col15a1O35206 Gm6222-202ENSMUST00000182143 629 ntBASIC17.66■□□□□ 0.42
Col15a1O35206 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC17.66■□□□□ 0.42
Col15a1O35206 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.66■□□□□ 0.42
Col15a1O35206 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col15a1O35206 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col15a1O35206 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col15a1O35206 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col15a1O35206 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.65■□□□□ 0.42
Col15a1O35206 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col15a1O35206 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col15a1O35206 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.65■□□□□ 0.42
Col15a1O35206 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col15a1O35206 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col15a1O35206 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col15a1O35206 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Col15a1O35206 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col15a1O35206 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col15a1O35206 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC17.65■□□□□ 0.42
Col15a1O35206 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col15a1O35206 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col15a1O35206 Gm18827-201ENSMUST00000188341 790 ntBASIC17.65■□□□□ 0.42
Col15a1O35206 Gm38158-201ENSMUST00000194617 339 ntBASIC17.65■□□□□ 0.42
Col15a1O35206 Gm42627-201ENSMUST00000197347 224 ntBASIC17.65■□□□□ 0.42
Col15a1O35206 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC17.65■□□□□ 0.42
Col15a1O35206 Gm18056-201ENSMUST00000207670 568 ntBASIC17.65■□□□□ 0.42
Col15a1O35206 Gm18061-201ENSMUST00000208350 562 ntBASIC17.65■□□□□ 0.42
Col15a1O35206 Gm18063-201ENSMUST00000208529 568 ntBASIC17.65■□□□□ 0.42
Col15a1O35206 Gm18052-201ENSMUST00000208750 559 ntBASIC17.65■□□□□ 0.42
Col15a1O35206 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Col15a1O35206 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col15a1O35206 CT485787.1-201ENSMUST00000225617 968 ntBASIC17.65■□□□□ 0.42
Col15a1O35206 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Col15a1O35206 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Col15a1O35206 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col15a1O35206 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col15a1O35206 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col15a1O35206 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col15a1O35206 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.65■□□□□ 0.42
Col15a1O35206 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Col15a1O35206 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col15a1O35206 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col15a1O35206 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms