Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Trav13-3-201ENSMUST00000117226 336 ntBASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Gm11453-201ENSMUST00000117318 1007 ntBASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav8-1A0A075B641 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 CT025678.1-201ENSMUST00000214795 2972 ntBASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Gm4459-201ENSMUST00000118750 468 ntBASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Gm10231-201ENSMUST00000181584 441 ntBASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Gm10175-202ENSMUST00000208752 441 ntBASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav8-1A0A075B641 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Trav8-1A0A075B641 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms