Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm15429-201ENSMUST00000151268 798 ntBASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Stag1Q9D3E6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Gm11425-201ENSMUST00000119608 498 ntBASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Gm8463-201ENSMUST00000208573 613 ntBASIC16.59■□□□□ 0.25
Stag1Q9D3E6 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.59■□□□□ 0.25
Stag1Q9D3E6 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Gm9396-201ENSMUST00000076703 567 ntBASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Stag1Q9D3E6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Stag1Q9D3E6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.58■□□□□ 0.25
Stag1Q9D3E6 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Stag1Q9D3E6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Stag1Q9D3E6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Stag1Q9D3E6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Stag1Q9D3E6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Stag1Q9D3E6 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Stag1Q9D3E6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Stag1Q9D3E6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Stag1Q9D3E6 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Stag1Q9D3E6 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.58■□□□□ 0.24
Stag1Q9D3E6 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.58■□□□□ 0.24
Stag1Q9D3E6 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Stag1Q9D3E6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Gm12928-201ENSMUST00000117115 573 ntBASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.57■□□□□ 0.24
Stag1Q9D3E6 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.57■□□□□ 0.24
Stag1Q9D3E6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms