Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tmem88Q9D0N8 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Tmem88Q9D0N8 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Tmem88Q9D0N8 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.04□□□□□ -0.64
Tmem88Q9D0N8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Gm15794-201ENSMUST00000120182 631 ntBASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Gm25927-201ENSMUST00000175058 117 ntBASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem88Q9D0N8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tmem88Q9D0N8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tmem88Q9D0N8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Tmem88Q9D0N8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.64
Tmem88Q9D0N8 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Tmem88Q9D0N8 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.02□□□□□ -0.64
Tmem88Q9D0N8 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.02□□□□□ -0.64
Tmem88Q9D0N8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tmem88Q9D0N8 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.02□□□□□ -0.64
Tmem88Q9D0N8 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Celf4-206ENSMUST00000224553 1729 ntBASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Gm13312-201ENSMUST00000119631 718 ntBASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Gm6257-201ENSMUST00000163864 910 ntBASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem88Q9D0N8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem88Q9D0N8 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem88Q9D0N8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem88Q9D0N8 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem88Q9D0N8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem88Q9D0N8 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.01□□□□□ -0.65
Tmem88Q9D0N8 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem88Q9D0N8 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem88Q9D0N8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem88Q9D0N8 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem88Q9D0N8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms