Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Smc3Q9CW03 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.43■□□□□ 0.22
Smc3Q9CW03 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.42■□□□□ 0.22
Smc3Q9CW03 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smc3Q9CW03 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.41■□□□□ 0.22
Smc3Q9CW03 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Smc3Q9CW03 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.41■□□□□ 0.22
Smc3Q9CW03 Gm13823-201ENSMUST00000119930 345 ntBASIC16.41■□□□□ 0.22
Smc3Q9CW03 Gm6222-201ENSMUST00000120787 396 ntBASIC16.41■□□□□ 0.22
Smc3Q9CW03 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.41■□□□□ 0.22
Smc3Q9CW03 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smc3Q9CW03 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.41■□□□□ 0.22
Smc3Q9CW03 BC001981-202ENSMUST00000191393 1545 ntBASIC16.4■□□□□ 0.22
Smc3Q9CW03 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.4■□□□□ 0.22
Smc3Q9CW03 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.4■□□□□ 0.22
Smc3Q9CW03 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smc3Q9CW03 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Smc3Q9CW03 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.39■□□□□ 0.21
Smc3Q9CW03 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms