Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Gm15590-201ENSMUST00000078419 552 ntBASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Thumpd1Q99J36 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Thumpd1Q99J36 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Gm7461-201ENSMUST00000058918 827 ntBASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms