Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Gm15427-201ENSMUST00000117288 531 ntBASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lrif1Q8CDD9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lrif1Q8CDD9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lrif1Q8CDD9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lrif1Q8CDD9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lrif1Q8CDD9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lrif1Q8CDD9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Gm27494-201ENSMUST00000184735 189 ntBASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Gm2272-201ENSMUST00000194903 582 ntBASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Lrif1Q8CDD9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Gm45612-201ENSMUST00000211320 160 ntBASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lrif1Q8CDD9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lrif1Q8CDD9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms