Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Gm16479-201ENSMUST00000121706 932 ntBASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Gm12134-201ENSMUST00000122109 520 ntBASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Gm15889-202ENSMUST00000212669 2443 ntBASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 Gm43579-201ENSMUST00000202387 1307 ntBASIC17.99■□□□□ 0.47
Col16a1Q8BLX7 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Gm4986-201ENSMUST00000119731 549 ntBASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Gm14381-201ENSMUST00000122105 414 ntBASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Gm10608-202ENSMUST00000213924 676 ntBASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Gm14608-201ENSMUST00000120030 1553 ntBASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col16a1Q8BLX7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.97■□□□□ 0.47
Col16a1Q8BLX7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Gm2606-201ENSMUST00000100754 1002 ntBASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Gm20482-202ENSMUST00000174729 825 ntBASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Gm7293-201ENSMUST00000216682 1007 ntBASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col16a1Q8BLX7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Col16a1Q8BLX7 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Col16a1Q8BLX7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.96■□□□□ 0.46
Col16a1Q8BLX7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Col16a1Q8BLX7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Col16a1Q8BLX7 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Col16a1Q8BLX7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Gm8793-201ENSMUST00000183069 1303 ntBASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Gm16202-201ENSMUST00000117532 544 ntBASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Gm6447-201ENSMUST00000118905 835 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms