Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.43■□□□□ 0.38
Nkx2-3P97334 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.43■□□□□ 0.38
Nkx2-3P97334 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Rn7sk-201ENSMUST00000083103 331 ntBASIC17.43■□□□□ 0.38
Nkx2-3P97334 Gm26315-201ENSMUST00000083890 321 ntBASIC17.43■□□□□ 0.38
Nkx2-3P97334 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-3P97334 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Gm8213-201ENSMUST00000118191 441 ntBASIC17.42■□□□□ 0.38
Nkx2-3P97334 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.42■□□□□ 0.38
Nkx2-3P97334 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-3P97334 Gm9755-201ENSMUST00000032981 1356 ntBASIC17.41■□□□□ 0.38
Nkx2-3P97334 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC17.41■□□□□ 0.38
Nkx2-3P97334 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Itm2b-204ENSMUST00000228637 783 ntBASIC17.41■□□□□ 0.38
Nkx2-3P97334 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Olfr582-201ENSMUST00000098212 960 ntBASIC17.41■□□□□ 0.38
Nkx2-3P97334 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.41■□□□□ 0.38
Nkx2-3P97334 Gm10040-201ENSMUST00000080726 1662 ntBASIC17.41■□□□□ 0.38
Nkx2-3P97334 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-3P97334 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-3P97334 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-3P97334 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-3P97334 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms