Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SgcbP82349 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SgcbP82349 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.47□□□□□ -0.41
SgcbP82349 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SgcbP82349 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.47□□□□□ -0.41
SgcbP82349 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgcbP82349 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.47□□□□□ -0.41
SgcbP82349 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SgcbP82349 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SgcbP82349 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SgcbP82349 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.46□□□□□ -0.41
SgcbP82349 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SgcbP82349 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SgcbP82349 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SgcbP82349 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SgcbP82349 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SgcbP82349 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SgcbP82349 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SgcbP82349 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SgcbP82349 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SgcbP82349 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SgcbP82349 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SgcbP82349 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SgcbP82349 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SgcbP82349 Gm15487-201ENSMUST00000122373 465 ntBASIC12.46□□□□□ -0.41
SgcbP82349 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SgcbP82349 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.46□□□□□ -0.41
SgcbP82349 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SgcbP82349 Gm21470-201ENSMUST00000187680 696 ntBASIC12.46□□□□□ -0.41
SgcbP82349 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.46□□□□□ -0.41
SgcbP82349 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.46□□□□□ -0.41
SgcbP82349 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.46□□□□□ -0.41
SgcbP82349 Gm20445-201ENSMUST00000061905 565 ntBASIC12.46□□□□□ -0.41
SgcbP82349 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
SgcbP82349 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SgcbP82349 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SgcbP82349 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SgcbP82349 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.46□□□□□ -0.42
SgcbP82349 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
SgcbP82349 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SgcbP82349 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SgcbP82349 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SgcbP82349 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SgcbP82349 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SgcbP82349 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.45□□□□□ -0.42
SgcbP82349 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.45□□□□□ -0.42
SgcbP82349 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.45□□□□□ -0.42
SgcbP82349 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SgcbP82349 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.45□□□□□ -0.42
SgcbP82349 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.45□□□□□ -0.42
SgcbP82349 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SgcbP82349 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SgcbP82349 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SgcbP82349 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SgcbP82349 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SgcbP82349 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SgcbP82349 Gm14719-201ENSMUST00000121891 340 ntBASIC12.45□□□□□ -0.42
SgcbP82349 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SgcbP82349 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.45□□□□□ -0.42
SgcbP82349 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SgcbP82349 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SgcbP82349 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.45□□□□□ -0.42
SgcbP82349 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SgcbP82349 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.45□□□□□ -0.42
SgcbP82349 Gm37714-201ENSMUST00000194742 342 ntBASIC12.45□□□□□ -0.42
SgcbP82349 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.45□□□□□ -0.42
SgcbP82349 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.45□□□□□ -0.42
SgcbP82349 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SgcbP82349 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.45□□□□□ -0.42
SgcbP82349 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SgcbP82349 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SgcbP82349 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SgcbP82349 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SgcbP82349 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SgcbP82349 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SgcbP82349 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SgcbP82349 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.44□□□□□ -0.42
SgcbP82349 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
SgcbP82349 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SgcbP82349 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SgcbP82349 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
SgcbP82349 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SgcbP82349 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SgcbP82349 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms