Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
Ldb1P70662 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.93□□□□□ -0.18
Ldb1P70662 Gm44608-201ENSMUST00000206827 855 ntBASIC13.93□□□□□ -0.18
Ldb1P70662 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Ldb1P70662 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb1P70662 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb1P70662 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb1P70662 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb1P70662 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb1P70662 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.93□□□□□ -0.18
Ldb1P70662 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.93□□□□□ -0.18
Ldb1P70662 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ldb1P70662 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb1P70662 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ldb1P70662 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Ldb1P70662 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.92□□□□□ -0.18
Ldb1P70662 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ldb1P70662 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ldb1P70662 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.92□□□□□ -0.18
Ldb1P70662 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.92□□□□□ -0.18
Ldb1P70662 Gm22175-201ENSMUST00000175007 78 ntBASIC13.92□□□□□ -0.18
Ldb1P70662 Gm27618-201ENSMUST00000183671 60 ntBASIC13.92□□□□□ -0.18
Ldb1P70662 Gm27533-201ENSMUST00000183800 152 ntBASIC13.92□□□□□ -0.18
Ldb1P70662 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.92□□□□□ -0.18
Ldb1P70662 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.92□□□□□ -0.18
Ldb1P70662 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.92□□□□□ -0.18
Ldb1P70662 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.92□□□□□ -0.18
Ldb1P70662 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ldb1P70662 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ldb1P70662 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ldb1P70662 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ldb1P70662 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.91□□□□□ -0.18
Ldb1P70662 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Ldb1P70662 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ldb1P70662 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.91□□□□□ -0.18
Ldb1P70662 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.91□□□□□ -0.18
Ldb1P70662 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ldb1P70662 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Ldb1P70662 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Ldb1P70662 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.91□□□□□ -0.18
Ldb1P70662 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ldb1P70662 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.91□□□□□ -0.18
Ldb1P70662 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ldb1P70662 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ldb1P70662 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ldb1P70662 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ldb1P70662 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.9□□□□□ -0.18
Ldb1P70662 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ldb1P70662 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ldb1P70662 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ldb1P70662 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ldb1P70662 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms