Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lsm6P62313 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
Lsm6P62313 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm6P62313 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Lsm6P62313 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm6P62313 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Lsm6P62313 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm6P62313 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm6P62313 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm6P62313 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm6P62313 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm6P62313 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm6P62313 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lsm6P62313 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Lsm6P62313 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.27□□□□□ -0.45
Lsm6P62313 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Lsm6P62313 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm6P62313 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.27□□□□□ -0.45
Lsm6P62313 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Lsm6P62313 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm6P62313 Gm2445-201ENSMUST00000182798 989 ntBASIC12.27□□□□□ -0.45
Lsm6P62313 Gm37714-201ENSMUST00000194742 342 ntBASIC12.27□□□□□ -0.45
Lsm6P62313 Gm6916-202ENSMUST00000205523 195 ntBASIC12.27□□□□□ -0.45
Lsm6P62313 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.27□□□□□ -0.45
Lsm6P62313 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm6P62313 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm6P62313 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm6P62313 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm6P62313 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm6P62313 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm6P62313 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm6P62313 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Lsm6P62313 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm6P62313 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm6P62313 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm6P62313 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.27□□□□□ -0.45
Lsm6P62313 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm6P62313 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.26□□□□□ -0.45
Lsm6P62313 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Lsm6P62313 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Lsm6P62313 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Lsm6P62313 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.26□□□□□ -0.45
Lsm6P62313 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.26□□□□□ -0.45
Lsm6P62313 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Lsm6P62313 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lsm6P62313 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lsm6P62313 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.26□□□□□ -0.45
Lsm6P62313 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.26□□□□□ -0.45
Lsm6P62313 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.26□□□□□ -0.45
Lsm6P62313 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm6P62313 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Lsm6P62313 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Lsm6P62313 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lsm6P62313 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lsm6P62313 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm6P62313 Gm14701-201ENSMUST00000117156 348 ntBASIC12.25□□□□□ -0.45
Lsm6P62313 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.25□□□□□ -0.45
Lsm6P62313 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms