Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.91□□□□□ -0.02
Mmp3P28862 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.91□□□□□ -0.02
Mmp3P28862 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Gm4984-201ENSMUST00000115987 360 ntBASIC14.91□□□□□ -0.02
Mmp3P28862 Gm12134-201ENSMUST00000122109 520 ntBASIC14.91□□□□□ -0.02
Mmp3P28862 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.91□□□□□ -0.02
Mmp3P28862 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Gm18062-201ENSMUST00000208020 547 ntBASIC14.91□□□□□ -0.02
Mmp3P28862 Gm18055-201ENSMUST00000208254 547 ntBASIC14.91□□□□□ -0.02
Mmp3P28862 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Mmp3P28862 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.91□□□□□ -0.02
Mmp3P28862 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.91□□□□□ -0.02
Mmp3P28862 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Mmp3P28862 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Mmp3P28862 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Mmp3P28862 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.91□□□□□ -0.02
Mmp3P28862 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Mmp3P28862 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Mmp3P28862 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Mmp3P28862 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Mmp3P28862 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Mmp3P28862 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Gm12928-201ENSMUST00000117115 573 ntBASIC14.9□□□□□ -0.02
Mmp3P28862 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.9□□□□□ -0.02
Mmp3P28862 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Mmp3P28862 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Gm17794-201ENSMUST00000220252 955 ntBASIC14.9□□□□□ -0.02
Mmp3P28862 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.9□□□□□ -0.02
Mmp3P28862 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.9□□□□□ -0.02
Mmp3P28862 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.9□□□□□ -0.02
Mmp3P28862 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.9□□□□□ -0.02
Mmp3P28862 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mmp3P28862 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Mmp3P28862 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.89□□□□□ -0.03
Mmp3P28862 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Mmp3P28862 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Mmp3P28862 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.89□□□□□ -0.03
Mmp3P28862 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.89□□□□□ -0.03
Mmp3P28862 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.89□□□□□ -0.03
Mmp3P28862 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.89□□□□□ -0.03
Mmp3P28862 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.89□□□□□ -0.03
Mmp3P28862 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.89□□□□□ -0.03
Mmp3P28862 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.89□□□□□ -0.03
Mmp3P28862 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Mmp3P28862 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.89□□□□□ -0.03
Mmp3P28862 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mmp3P28862 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms