Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.04□□□□□ -0.16
RxrbP28704 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.04□□□□□ -0.16
RxrbP28704 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RxrbP28704 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RxrbP28704 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RxrbP28704 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RxrbP28704 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
RxrbP28704 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RxrbP28704 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RxrbP28704 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RxrbP28704 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RxrbP28704 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RxrbP28704 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RxrbP28704 Gm14140-201ENSMUST00000119999 995 ntBASIC14.03□□□□□ -0.16
RxrbP28704 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.03□□□□□ -0.16
RxrbP28704 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.03□□□□□ -0.16
RxrbP28704 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.03□□□□□ -0.16
RxrbP28704 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.03□□□□□ -0.16
RxrbP28704 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RxrbP28704 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RxrbP28704 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RxrbP28704 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RxrbP28704 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
RxrbP28704 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RxrbP28704 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RxrbP28704 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RxrbP28704 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RxrbP28704 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RxrbP28704 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RxrbP28704 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.02□□□□□ -0.16
RxrbP28704 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RxrbP28704 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RxrbP28704 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.02□□□□□ -0.16
RxrbP28704 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RxrbP28704 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RxrbP28704 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RxrbP28704 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
RxrbP28704 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RxrbP28704 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RxrbP28704 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
RxrbP28704 Gm5177-201ENSMUST00000183092 997 ntBASIC14.02□□□□□ -0.17
RxrbP28704 Gm27301-201ENSMUST00000184012 127 ntBASIC14.02□□□□□ -0.17
RxrbP28704 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RxrbP28704 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.02□□□□□ -0.17
RxrbP28704 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RxrbP28704 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RxrbP28704 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RxrbP28704 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RxrbP28704 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
RxrbP28704 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RxrbP28704 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RxrbP28704 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.02□□□□□ -0.17
RxrbP28704 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
RxrbP28704 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RxrbP28704 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RxrbP28704 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
RxrbP28704 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RxrbP28704 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RxrbP28704 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RxrbP28704 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RxrbP28704 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RxrbP28704 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.01□□□□□ -0.17
RxrbP28704 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RxrbP28704 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RxrbP28704 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RxrbP28704 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RxrbP28704 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RxrbP28704 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RxrbP28704 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RxrbP28704 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RxrbP28704 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RxrbP28704 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.01□□□□□ -0.17
RxrbP28704 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms