Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Nckap1P28660 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nckap1P28660 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nckap1P28660 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.89□□□□□ -0.19
Nckap1P28660 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.89□□□□□ -0.19
Nckap1P28660 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.89□□□□□ -0.19
Nckap1P28660 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.89□□□□□ -0.19
Nckap1P28660 Mir7654-201ENSMUST00000185082 70 ntBASIC13.89□□□□□ -0.19
Nckap1P28660 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.89□□□□□ -0.19
Nckap1P28660 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Nckap1P28660 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nckap1P28660 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nckap1P28660 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.88□□□□□ -0.19
Nckap1P28660 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nckap1P28660 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nckap1P28660 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.88□□□□□ -0.19
Nckap1P28660 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nckap1P28660 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Nckap1P28660 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.88□□□□□ -0.19
Nckap1P28660 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.88□□□□□ -0.19
Nckap1P28660 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.88□□□□□ -0.19
Nckap1P28660 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.88□□□□□ -0.19
Nckap1P28660 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.88□□□□□ -0.19
Nckap1P28660 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.88□□□□□ -0.19
Nckap1P28660 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nckap1P28660 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nckap1P28660 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nckap1P28660 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Nckap1P28660 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Nckap1P28660 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nckap1P28660 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Nckap1P28660 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.87□□□□□ -0.19
Nckap1P28660 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.87□□□□□ -0.19
Nckap1P28660 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.87□□□□□ -0.19
Nckap1P28660 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.87□□□□□ -0.19
Nckap1P28660 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.87□□□□□ -0.19
Nckap1P28660 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.87□□□□□ -0.19
Nckap1P28660 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.87□□□□□ -0.19
Nckap1P28660 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.87□□□□□ -0.19
Nckap1P28660 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.87□□□□□ -0.19
Nckap1P28660 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms