Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Hoxa4P06798 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.73□□□□□ -0.21
Hoxa4P06798 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Hoxa4P06798 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Hoxa4P06798 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.73□□□□□ -0.21
Hoxa4P06798 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Hoxa4P06798 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.73□□□□□ -0.21
Hoxa4P06798 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Hoxa4P06798 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.73□□□□□ -0.21
Hoxa4P06798 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.73□□□□□ -0.21
Hoxa4P06798 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.73□□□□□ -0.21
Hoxa4P06798 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Hoxa4P06798 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.72□□□□□ -0.21
Hoxa4P06798 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hoxa4P06798 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.72□□□□□ -0.21
Hoxa4P06798 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hoxa4P06798 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.72□□□□□ -0.21
Hoxa4P06798 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.72□□□□□ -0.21
Hoxa4P06798 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.72□□□□□ -0.21
Hoxa4P06798 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.72□□□□□ -0.21
Hoxa4P06798 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Hoxa4P06798 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxa4P06798 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.72□□□□□ -0.21
Hoxa4P06798 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
Hoxa4P06798 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Gm12859-201ENSMUST00000117834 427 ntBASIC13.71□□□□□ -0.21
Hoxa4P06798 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.71□□□□□ -0.21
Hoxa4P06798 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.71□□□□□ -0.21
Hoxa4P06798 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.71□□□□□ -0.21
Hoxa4P06798 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Hoxa4P06798 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.71□□□□□ -0.21
Hoxa4P06798 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.71□□□□□ -0.21
Hoxa4P06798 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.71□□□□□ -0.21
Hoxa4P06798 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Hoxa4P06798 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxa4P06798 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.71□□□□□ -0.22
Hoxa4P06798 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxa4P06798 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxa4P06798 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Hoxa4P06798 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxa4P06798 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxa4P06798 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxa4P06798 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms