Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.79□□□□□ -0.68
P03980 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC10.79□□□□□ -0.68
P03980 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC10.79□□□□□ -0.68
P03980 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.79□□□□□ -0.68
P03980 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC10.79□□□□□ -0.68
P03980 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC10.79□□□□□ -0.68
P03980 Gm27920-201ENSMUST00000183953 96 ntBASIC10.79□□□□□ -0.68
P03980 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC10.79□□□□□ -0.68
P03980 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
P03980 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.79□□□□□ -0.68
P03980 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.79□□□□□ -0.68
P03980 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.79□□□□□ -0.68
P03980 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P03980 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.78□□□□□ -0.68
P03980 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC10.78□□□□□ -0.68
P03980 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
P03980 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.78□□□□□ -0.68
P03980 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
P03980 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.78□□□□□ -0.68
P03980 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
P03980 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC10.78□□□□□ -0.68
P03980 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC10.78□□□□□ -0.68
P03980 Mir5126-201ENSMUST00000175513 77 ntBASIC10.78□□□□□ -0.68
P03980 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
P03980 Mir8098-201ENSMUST00000184011 137 ntBASIC10.78□□□□□ -0.68
P03980 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC10.78□□□□□ -0.68
P03980 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC10.78□□□□□ -0.68
P03980 Gm7461-201ENSMUST00000058918 827 ntBASIC10.78□□□□□ -0.68
P03980 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
P03980 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
P03980 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC10.78□□□□□ -0.68
P03980 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P03980 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P03980 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.68
P03980 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
P03980 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P03980 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P03980 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
P03980 Gm6756-201ENSMUST00000180647 1620 ntBASIC10.77□□□□□ -0.68
P03980 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
P03980 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
P03980 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
P03980 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P03980 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC10.77□□□□□ -0.69
P03980 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
P03980 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P03980 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P03980 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.77□□□□□ -0.69
P03980 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P03980 Gm25925-201ENSMUST00000158314 306 ntBASIC10.77□□□□□ -0.69
P03980 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P03980 Gm5864-201ENSMUST00000202263 970 ntBASIC10.77□□□□□ -0.69
P03980 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
P03980 CT025555.1-201ENSMUST00000225901 1217 ntBASIC10.77□□□□□ -0.69
P03980 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
P03980 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms