Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ifna1P01572 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Ifna1P01572 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ifna1P01572 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.78□□□□□ -0.52
Ifna1P01572 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.78□□□□□ -0.52
Ifna1P01572 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ifna1P01572 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ifna1P01572 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ifna1P01572 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ifna1P01572 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ifna1P01572 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ifna1P01572 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ifna1P01572 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ifna1P01572 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ifna1P01572 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ifna1P01572 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ifna1P01572 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.77□□□□□ -0.52
Ifna1P01572 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.77□□□□□ -0.53
Ifna1P01572 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.77□□□□□ -0.53
Ifna1P01572 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.77□□□□□ -0.53
Ifna1P01572 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.77□□□□□ -0.53
Ifna1P01572 Gm15483-201ENSMUST00000120338 456 ntBASIC11.77□□□□□ -0.53
Ifna1P01572 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.77□□□□□ -0.53
Ifna1P01572 Gm5177-201ENSMUST00000183092 997 ntBASIC11.77□□□□□ -0.53
Ifna1P01572 Mir8098-201ENSMUST00000184011 137 ntBASIC11.77□□□□□ -0.53
Ifna1P01572 Gm21362-201ENSMUST00000194272 928 ntBASIC11.77□□□□□ -0.53
Ifna1P01572 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ifna1P01572 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Ifna1P01572 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ifna1P01572 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Ifna1P01572 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ifna1P01572 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.76□□□□□ -0.53
Ifna1P01572 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.76□□□□□ -0.53
Ifna1P01572 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ifna1P01572 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.76□□□□□ -0.53
Ifna1P01572 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.76□□□□□ -0.53
Ifna1P01572 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ifna1P01572 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ifna1P01572 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ifna1P01572 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.76□□□□□ -0.53
Ifna1P01572 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ifna1P01572 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.76□□□□□ -0.53
Ifna1P01572 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.76□□□□□ -0.53
Ifna1P01572 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ifna1P01572 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ifna1P01572 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ifna1P01572 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.75□□□□□ -0.53
Ifna1P01572 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ifna1P01572 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ifna1P01572 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms