Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNX4O95219 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SNX4O95219 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SNX4O95219 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SNX4O95219 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SNX4O95219 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SNX4O95219 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.01■□□□□ 0.15
SNX4O95219 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SNX4O95219 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.01■□□□□ 0.15
SNX4O95219 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.01■□□□□ 0.15
SNX4O95219 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SNX4O95219 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.01■□□□□ 0.15
SNX4O95219 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.01■□□□□ 0.15
SNX4O95219 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SNX4O95219 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SNX4O95219 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.01■□□□□ 0.15
SNX4O95219 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNX4O95219 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.01■□□□□ 0.15
SNX4O95219 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNX4O95219 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SNX4O95219 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNX4O95219 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNX4O95219 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.01■□□□□ 0.15
SNX4O95219 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SNX4O95219 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNX4O95219 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.01■□□□□ 0.15
SNX4O95219 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SNX4O95219 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SNX4O95219 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SNX4O95219 KLF4P1-201ENST00000412782 1185 ntBASIC16.01■□□□□ 0.15
SNX4O95219 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.01■□□□□ 0.15
SNX4O95219 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
SNX4O95219 AC009078.2-202ENST00000463353 338 ntBASIC16.01■□□□□ 0.15
SNX4O95219 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.01■□□□□ 0.15
SNX4O95219 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.01■□□□□ 0.15
SNX4O95219 SART3-203ENST00000546611 1184 ntBASIC16.01■□□□□ 0.15
SNX4O95219 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.01■□□□□ 0.15
SNX4O95219 NKAPP1-205ENST00000585790 367 ntBASIC16.01■□□□□ 0.15
SNX4O95219 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.01■□□□□ 0.15
SNX4O95219 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SNX4O95219 AL022326.1-202ENST00000641533 845 ntBASIC16.01■□□□□ 0.15
SNX4O95219 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SNX4O95219 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNX4O95219 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNX4O95219 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SNX4O95219 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.01■□□□□ 0.15
SNX4O95219 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
SNX4O95219 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.01■□□□□ 0.15
SNX4O95219 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.01■□□□□ 0.15
SNX4O95219 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SNX4O95219 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNX4O95219 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.01■□□□□ 0.15
SNX4O95219 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SNX4O95219 AC106886.4-201ENST00000623557 2502 ntBASIC16.01■□□□□ 0.15
SNX4O95219 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.01■□□□□ 0.15
SNX4O95219 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNX4O95219 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SNX4O95219 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SNX4O95219 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SNX4O95219 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SNX4O95219 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.01■□□□□ 0.15
SNX4O95219 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16■□□□□ 0.15
SNX4O95219 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16■□□□□ 0.15
SNX4O95219 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SNX4O95219 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SNX4O95219 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SNX4O95219 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNX4O95219 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16■□□□□ 0.15
SNX4O95219 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNX4O95219 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16■□□□□ 0.15
SNX4O95219 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SNX4O95219 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16■□□□□ 0.15
SNX4O95219 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16■□□□□ 0.15
SNX4O95219 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SNX4O95219 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16■□□□□ 0.15
SNX4O95219 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SNX4O95219 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNX4O95219 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16■□□□□ 0.15
SNX4O95219 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNX4O95219 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNX4O95219 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNX4O95219 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SNX4O95219 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16■□□□□ 0.15
SNX4O95219 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16■□□□□ 0.15
SNX4O95219 AC093909.1-201ENST00000504731 1122 ntBASIC16■□□□□ 0.15
SNX4O95219 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16■□□□□ 0.15
SNX4O95219 MOK-208ENST00000519058 917 ntTSL 2 BASIC16■□□□□ 0.15
SNX4O95219 PENK-208ENST00000523051 772 ntTSL 5 BASIC16■□□□□ 0.15
SNX4O95219 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16■□□□□ 0.15
SNX4O95219 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
SNX4O95219 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16■□□□□ 0.15
SNX4O95219 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16■□□□□ 0.15
SNX4O95219 STK25P1-201ENST00000585406 838 ntBASIC16■□□□□ 0.15
SNX4O95219 SLC25A6P4-201ENST00000586535 553 ntBASIC16■□□□□ 0.15
SNX4O95219 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SNX4O95219 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16■□□□□ 0.15
SNX4O95219 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
SNX4O95219 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16■□□□□ 0.15
SNX4O95219 AC132938.5-201ENST00000624980 1813 ntBASIC16■□□□□ 0.15
SNX4O95219 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms