Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClppO88696 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClppO88696 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClppO88696 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClppO88696 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
ClppO88696 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClppO88696 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClppO88696 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ClppO88696 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ClppO88696 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ClppO88696 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClppO88696 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClppO88696 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClppO88696 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClppO88696 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ClppO88696 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClppO88696 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ClppO88696 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.69□□□□□ -0.22
ClppO88696 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClppO88696 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClppO88696 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClppO88696 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.69□□□□□ -0.22
ClppO88696 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
ClppO88696 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClppO88696 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.69□□□□□ -0.22
ClppO88696 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClppO88696 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ClppO88696 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.69□□□□□ -0.22
ClppO88696 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ClppO88696 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.69□□□□□ -0.22
ClppO88696 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ClppO88696 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.69□□□□□ -0.22
ClppO88696 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.69□□□□□ -0.22
ClppO88696 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.69□□□□□ -0.22
ClppO88696 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClppO88696 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ClppO88696 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ClppO88696 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClppO88696 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.69□□□□□ -0.22
ClppO88696 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClppO88696 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ClppO88696 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
ClppO88696 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ClppO88696 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClppO88696 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ClppO88696 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClppO88696 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ClppO88696 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
ClppO88696 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
ClppO88696 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
ClppO88696 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ClppO88696 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.68□□□□□ -0.22
ClppO88696 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
ClppO88696 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.68□□□□□ -0.22
ClppO88696 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ClppO88696 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClppO88696 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ClppO88696 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
ClppO88696 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.67□□□□□ -0.22
ClppO88696 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.67□□□□□ -0.22
ClppO88696 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.67□□□□□ -0.22
ClppO88696 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.67□□□□□ -0.22
ClppO88696 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.67□□□□□ -0.22
ClppO88696 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.67□□□□□ -0.22
ClppO88696 Gm16215-201ENSMUST00000161990 637 ntBASIC13.67□□□□□ -0.22
ClppO88696 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
ClppO88696 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms