Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl13O55038 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.79□□□□□ -0.52
Cxcl13O55038 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl13O55038 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl13O55038 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Cxcl13O55038 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl13O55038 Gm14127-201ENSMUST00000117906 678 ntBASIC11.79□□□□□ -0.52
Cxcl13O55038 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.79□□□□□ -0.52
Cxcl13O55038 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.79□□□□□ -0.52
Cxcl13O55038 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.79□□□□□ -0.52
Cxcl13O55038 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.79□□□□□ -0.52
Cxcl13O55038 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.79□□□□□ -0.52
Cxcl13O55038 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl13O55038 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl13O55038 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl13O55038 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl13O55038 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl13O55038 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.79□□□□□ -0.52
Cxcl13O55038 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl13O55038 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl13O55038 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.79□□□□□ -0.52
Cxcl13O55038 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl13O55038 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl13O55038 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.79□□□□□ -0.52
Cxcl13O55038 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl13O55038 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl13O55038 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl13O55038 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl13O55038 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl13O55038 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl13O55038 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl13O55038 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl13O55038 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.78□□□□□ -0.52
Cxcl13O55038 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cxcl13O55038 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.78□□□□□ -0.52
Cxcl13O55038 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cxcl13O55038 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.78□□□□□ -0.52
Cxcl13O55038 Gm8602-201ENSMUST00000184045 607 ntBASIC11.78□□□□□ -0.52
Cxcl13O55038 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.78□□□□□ -0.52
Cxcl13O55038 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.78□□□□□ -0.52
Cxcl13O55038 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Cxcl13O55038 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cxcl13O55038 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Cxcl13O55038 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl13O55038 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.52
Cxcl13O55038 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Cxcl13O55038 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cxcl13O55038 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cxcl13O55038 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cxcl13O55038 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cxcl13O55038 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cxcl13O55038 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cxcl13O55038 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cxcl13O55038 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cxcl13O55038 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cxcl13O55038 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl13O55038 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl13O55038 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cxcl13O55038 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl13O55038 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.77□□□□□ -0.53
Cxcl13O55038 Gm12485-201ENSMUST00000119641 291 ntBASIC11.77□□□□□ -0.53
Cxcl13O55038 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl13O55038 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl13O55038 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms