Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.85□□□□□ -0.51
BC035044E0CXF8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Gm13015-201ENSMUST00000118674 204 ntBASIC11.85□□□□□ -0.51
BC035044E0CXF8 Gm12260-201ENSMUST00000122447 411 ntBASIC11.85□□□□□ -0.51
BC035044E0CXF8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.85□□□□□ -0.51
BC035044E0CXF8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.85□□□□□ -0.51
BC035044E0CXF8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.85□□□□□ -0.51
BC035044E0CXF8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.85□□□□□ -0.51
BC035044E0CXF8 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.85□□□□□ -0.51
BC035044E0CXF8 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
BC035044E0CXF8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.85□□□□□ -0.51
BC035044E0CXF8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
BC035044E0CXF8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.84□□□□□ -0.51
BC035044E0CXF8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Gm45612-201ENSMUST00000211320 160 ntBASIC11.84□□□□□ -0.51
BC035044E0CXF8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Gm10175-201ENSMUST00000086013 645 ntBASIC11.84□□□□□ -0.51
BC035044E0CXF8 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
BC035044E0CXF8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
BC035044E0CXF8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
BC035044E0CXF8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BC035044E0CXF8 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC035044E0CXF8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
BC035044E0CXF8 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.83□□□□□ -0.52
BC035044E0CXF8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC035044E0CXF8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BC035044E0CXF8 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BC035044E0CXF8 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BC035044E0CXF8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC035044E0CXF8 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC035044E0CXF8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC035044E0CXF8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC035044E0CXF8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC035044E0CXF8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BC035044E0CXF8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.83□□□□□ -0.52
BC035044E0CXF8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
BC035044E0CXF8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms