Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.39■□□□□ 0.54
Cx3cr1Q9Z0D9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cx3cr1Q9Z0D9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cx3cr1Q9Z0D9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cx3cr1Q9Z0D9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cx3cr1Q9Z0D9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cx3cr1Q9Z0D9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cx3cr1Q9Z0D9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cx3cr1Q9Z0D9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cx3cr1Q9Z0D9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cx3cr1Q9Z0D9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Cx3cr1Q9Z0D9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.38■□□□□ 0.53
Cx3cr1Q9Z0D9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cx3cr1Q9Z0D9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cr1Q9Z0D9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cr1Q9Z0D9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cr1Q9Z0D9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cx3cr1Q9Z0D9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cr1Q9Z0D9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cr1Q9Z0D9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cx3cr1Q9Z0D9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cr1Q9Z0D9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cr1Q9Z0D9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cr1Q9Z0D9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cr1Q9Z0D9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cr1Q9Z0D9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cx3cr1Q9Z0D9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.36■□□□□ 0.53
Cx3cr1Q9Z0D9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cx3cr1Q9Z0D9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.36■□□□□ 0.53
Cx3cr1Q9Z0D9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Cx3cr1Q9Z0D9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cx3cr1Q9Z0D9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cx3cr1Q9Z0D9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cx3cr1Q9Z0D9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cx3cr1Q9Z0D9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cx3cr1Q9Z0D9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cx3cr1Q9Z0D9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cx3cr1Q9Z0D9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.35■□□□□ 0.53
Cx3cr1Q9Z0D9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.35■□□□□ 0.53
Cx3cr1Q9Z0D9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.35■□□□□ 0.53
Cx3cr1Q9Z0D9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cx3cr1Q9Z0D9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cx3cr1Q9Z0D9 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.34■□□□□ 0.53
Cx3cr1Q9Z0D9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cx3cr1Q9Z0D9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cx3cr1Q9Z0D9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cx3cr1Q9Z0D9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cx3cr1Q9Z0D9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cx3cr1Q9Z0D9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
Cx3cr1Q9Z0D9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.33■□□□□ 0.52
Cx3cr1Q9Z0D9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cx3cr1Q9Z0D9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cx3cr1Q9Z0D9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cx3cr1Q9Z0D9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cx3cr1Q9Z0D9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cx3cr1Q9Z0D9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Cx3cr1Q9Z0D9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cx3cr1Q9Z0D9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cx3cr1Q9Z0D9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cx3cr1Q9Z0D9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cx3cr1Q9Z0D9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cx3cr1Q9Z0D9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cx3cr1Q9Z0D9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cx3cr1Q9Z0D9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cx3cr1Q9Z0D9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cr1Q9Z0D9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cr1Q9Z0D9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cr1Q9Z0D9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cr1Q9Z0D9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cr1Q9Z0D9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cr1Q9Z0D9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.31■□□□□ 0.52
Cx3cr1Q9Z0D9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cx3cr1Q9Z0D9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cx3cr1Q9Z0D9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.3■□□□□ 0.52
Cx3cr1Q9Z0D9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cx3cr1Q9Z0D9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cx3cr1Q9Z0D9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cx3cr1Q9Z0D9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.3■□□□□ 0.52
Cx3cr1Q9Z0D9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cx3cr1Q9Z0D9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Cx3cr1Q9Z0D9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cx3cr1Q9Z0D9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cx3cr1Q9Z0D9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.29■□□□□ 0.52
Cx3cr1Q9Z0D9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cx3cr1Q9Z0D9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cx3cr1Q9Z0D9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cx3cr1Q9Z0D9 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.28■□□□□ 0.52
Cx3cr1Q9Z0D9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.28■□□□□ 0.52
Cx3cr1Q9Z0D9 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.28■□□□□ 0.52
Cx3cr1Q9Z0D9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cx3cr1Q9Z0D9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.28■□□□□ 0.52
Cx3cr1Q9Z0D9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cx3cr1Q9Z0D9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cx3cr1Q9Z0D9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cx3cr1Q9Z0D9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.27■□□□□ 0.52
Cx3cr1Q9Z0D9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cx3cr1Q9Z0D9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cx3cr1Q9Z0D9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cx3cr1Q9Z0D9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cx3cr1Q9Z0D9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms