Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.96■□□□□ 0.79
ClcnkaQ9WUB7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ClcnkaQ9WUB7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ClcnkaQ9WUB7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ClcnkaQ9WUB7 Gm14523-201ENSMUST00000117260 558 ntBASIC19.95■□□□□ 0.78
ClcnkaQ9WUB7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.95■□□□□ 0.78
ClcnkaQ9WUB7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ClcnkaQ9WUB7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ClcnkaQ9WUB7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ClcnkaQ9WUB7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ClcnkaQ9WUB7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ClcnkaQ9WUB7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ClcnkaQ9WUB7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ClcnkaQ9WUB7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ClcnkaQ9WUB7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ClcnkaQ9WUB7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ClcnkaQ9WUB7 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ClcnkaQ9WUB7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ClcnkaQ9WUB7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ClcnkaQ9WUB7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ClcnkaQ9WUB7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ClcnkaQ9WUB7 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.92■□□□□ 0.78
ClcnkaQ9WUB7 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.92■□□□□ 0.78
ClcnkaQ9WUB7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClcnkaQ9WUB7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.92■□□□□ 0.78
ClcnkaQ9WUB7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClcnkaQ9WUB7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClcnkaQ9WUB7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.92■□□□□ 0.78
ClcnkaQ9WUB7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ClcnkaQ9WUB7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.92■□□□□ 0.78
ClcnkaQ9WUB7 Gm12366-201ENSMUST00000121722 873 ntBASIC19.92■□□□□ 0.78
ClcnkaQ9WUB7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.92■□□□□ 0.78
ClcnkaQ9WUB7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.92■□□□□ 0.78
ClcnkaQ9WUB7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.92■□□□□ 0.78
ClcnkaQ9WUB7 Gm5786-201ENSMUST00000085368 882 ntBASIC19.92■□□□□ 0.78
ClcnkaQ9WUB7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClcnkaQ9WUB7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClcnkaQ9WUB7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClcnkaQ9WUB7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ClcnkaQ9WUB7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ClcnkaQ9WUB7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ClcnkaQ9WUB7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ClcnkaQ9WUB7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ClcnkaQ9WUB7 Gm7332-201ENSMUST00000118351 454 ntBASIC19.91■□□□□ 0.78
ClcnkaQ9WUB7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.91■□□□□ 0.78
ClcnkaQ9WUB7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ClcnkaQ9WUB7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.91■□□□□ 0.78
ClcnkaQ9WUB7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.91■□□□□ 0.78
ClcnkaQ9WUB7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ClcnkaQ9WUB7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ClcnkaQ9WUB7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.9■□□□□ 0.78
ClcnkaQ9WUB7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ClcnkaQ9WUB7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ClcnkaQ9WUB7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ClcnkaQ9WUB7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ClcnkaQ9WUB7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ClcnkaQ9WUB7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ClcnkaQ9WUB7 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ClcnkaQ9WUB7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ClcnkaQ9WUB7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ClcnkaQ9WUB7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ClcnkaQ9WUB7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
ClcnkaQ9WUB7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ClcnkaQ9WUB7 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.89■□□□□ 0.77
ClcnkaQ9WUB7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ClcnkaQ9WUB7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ClcnkaQ9WUB7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.89■□□□□ 0.77
ClcnkaQ9WUB7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.89■□□□□ 0.77
ClcnkaQ9WUB7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ClcnkaQ9WUB7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ClcnkaQ9WUB7 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.88■□□□□ 0.77
ClcnkaQ9WUB7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ClcnkaQ9WUB7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ClcnkaQ9WUB7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ClcnkaQ9WUB7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.87■□□□□ 0.77
ClcnkaQ9WUB7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.87■□□□□ 0.77
ClcnkaQ9WUB7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ClcnkaQ9WUB7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ClcnkaQ9WUB7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.87■□□□□ 0.77
ClcnkaQ9WUB7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ClcnkaQ9WUB7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClcnkaQ9WUB7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClcnkaQ9WUB7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClcnkaQ9WUB7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.86■□□□□ 0.77
ClcnkaQ9WUB7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClcnkaQ9WUB7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClcnkaQ9WUB7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClcnkaQ9WUB7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.86■□□□□ 0.77
ClcnkaQ9WUB7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ClcnkaQ9WUB7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.85■□□□□ 0.77
ClcnkaQ9WUB7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.85■□□□□ 0.77
ClcnkaQ9WUB7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ClcnkaQ9WUB7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ClcnkaQ9WUB7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ClcnkaQ9WUB7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ClcnkaQ9WUB7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ClcnkaQ9WUB7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ClcnkaQ9WUB7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClcnkaQ9WUB7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClcnkaQ9WUB7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms