Protein–RNA interactions for Protein: Q9QX15

Clca3a1, Calcium-activated chloride channel regulator 3A-1, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a1Q9QX15 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.45■□□□□ 0.86
Clca3a1Q9QX15 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Clca3a1Q9QX15 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clca3a1Q9QX15 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clca3a1Q9QX15 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Clca3a1Q9QX15 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.45■□□□□ 0.86
Clca3a1Q9QX15 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clca3a1Q9QX15 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clca3a1Q9QX15 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Clca3a1Q9QX15 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clca3a1Q9QX15 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.44■□□□□ 0.86
Clca3a1Q9QX15 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clca3a1Q9QX15 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clca3a1Q9QX15 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clca3a1Q9QX15 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.43■□□□□ 0.86
Clca3a1Q9QX15 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clca3a1Q9QX15 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Clca3a1Q9QX15 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clca3a1Q9QX15 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clca3a1Q9QX15 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Clca3a1Q9QX15 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Clca3a1Q9QX15 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clca3a1Q9QX15 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Clca3a1Q9QX15 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clca3a1Q9QX15 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Clca3a1Q9QX15 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Clca3a1Q9QX15 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Clca3a1Q9QX15 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.4■□□□□ 0.86
Clca3a1Q9QX15 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Clca3a1Q9QX15 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.4■□□□□ 0.86
Clca3a1Q9QX15 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clca3a1Q9QX15 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Clca3a1Q9QX15 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.39■□□□□ 0.85
Clca3a1Q9QX15 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Clca3a1Q9QX15 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Clca3a1Q9QX15 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clca3a1Q9QX15 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.38■□□□□ 0.85
Clca3a1Q9QX15 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clca3a1Q9QX15 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clca3a1Q9QX15 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Clca3a1Q9QX15 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Clca3a1Q9QX15 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clca3a1Q9QX15 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clca3a1Q9QX15 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clca3a1Q9QX15 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clca3a1Q9QX15 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Clca3a1Q9QX15 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clca3a1Q9QX15 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Clca3a1Q9QX15 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
Clca3a1Q9QX15 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clca3a1Q9QX15 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clca3a1Q9QX15 Gm11175-201ENSMUST00000116172 543 ntBASIC20.36■□□□□ 0.85
Clca3a1Q9QX15 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clca3a1Q9QX15 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.36■□□□□ 0.85
Clca3a1Q9QX15 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clca3a1Q9QX15 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.35■□□□□ 0.85
Clca3a1Q9QX15 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Clca3a1Q9QX15 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clca3a1Q9QX15 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.35■□□□□ 0.85
Clca3a1Q9QX15 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clca3a1Q9QX15 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clca3a1Q9QX15 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Clca3a1Q9QX15 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Clca3a1Q9QX15 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Clca3a1Q9QX15 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clca3a1Q9QX15 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Clca3a1Q9QX15 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Clca3a1Q9QX15 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clca3a1Q9QX15 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clca3a1Q9QX15 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Clca3a1Q9QX15 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clca3a1Q9QX15 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Clca3a1Q9QX15 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clca3a1Q9QX15 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Clca3a1Q9QX15 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.33■□□□□ 0.84
Clca3a1Q9QX15 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clca3a1Q9QX15 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.32■□□□□ 0.84
Clca3a1Q9QX15 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Clca3a1Q9QX15 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Clca3a1Q9QX15 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clca3a1Q9QX15 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clca3a1Q9QX15 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clca3a1Q9QX15 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clca3a1Q9QX15 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Clca3a1Q9QX15 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Clca3a1Q9QX15 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.31■□□□□ 0.84
Clca3a1Q9QX15 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
Clca3a1Q9QX15 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.31■□□□□ 0.84
Clca3a1Q9QX15 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clca3a1Q9QX15 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clca3a1Q9QX15 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clca3a1Q9QX15 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clca3a1Q9QX15 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clca3a1Q9QX15 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clca3a1Q9QX15 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.3■□□□□ 0.84
Clca3a1Q9QX15 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clca3a1Q9QX15 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Clca3a1Q9QX15 Mir6538-201ENSMUST00000183713 110 ntBASIC20.29■□□□□ 0.84
Clca3a1Q9QX15 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Clca3a1Q9QX15 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms