Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl55Q9CZ83 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Mrpl55Q9CZ83 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Mrpl55Q9CZ83 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl55Q9CZ83 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Mrpl55Q9CZ83 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl55Q9CZ83 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl55Q9CZ83 Gm11175-201ENSMUST00000116172 543 ntBASIC14.16□□□□□ -0.14
Mrpl55Q9CZ83 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Mrpl55Q9CZ83 Gm37136-201ENSMUST00000194368 194 ntBASIC14.16□□□□□ -0.14
Mrpl55Q9CZ83 Mir3960-201ENSMUST00000198213 73 ntBASIC14.16□□□□□ -0.14
Mrpl55Q9CZ83 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC14.16□□□□□ -0.14
Mrpl55Q9CZ83 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl55Q9CZ83 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl55Q9CZ83 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl55Q9CZ83 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Mrpl55Q9CZ83 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl55Q9CZ83 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl55Q9CZ83 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl55Q9CZ83 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.15□□□□□ -0.14
Mrpl55Q9CZ83 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Mrpl55Q9CZ83 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl55Q9CZ83 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl55Q9CZ83 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl55Q9CZ83 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl55Q9CZ83 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl55Q9CZ83 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl55Q9CZ83 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl55Q9CZ83 Gm11687-201ENSMUST00000118911 886 ntBASIC14.14□□□□□ -0.15
Mrpl55Q9CZ83 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl55Q9CZ83 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl55Q9CZ83 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl55Q9CZ83 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl55Q9CZ83 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl55Q9CZ83 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl55Q9CZ83 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl55Q9CZ83 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
Mrpl55Q9CZ83 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Mrpl55Q9CZ83 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl55Q9CZ83 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl55Q9CZ83 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl55Q9CZ83 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl55Q9CZ83 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Mrpl55Q9CZ83 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl55Q9CZ83 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl55Q9CZ83 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl55Q9CZ83 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mrpl55Q9CZ83 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mrpl55Q9CZ83 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mrpl55Q9CZ83 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mrpl55Q9CZ83 Scarna2-201ENSMUST00000157560 414 ntBASIC14.12□□□□□ -0.15
Mrpl55Q9CZ83 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC14.12□□□□□ -0.15
Mrpl55Q9CZ83 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Mrpl55Q9CZ83 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Mrpl55Q9CZ83 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mrpl55Q9CZ83 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mrpl55Q9CZ83 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Mrpl55Q9CZ83 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Mrpl55Q9CZ83 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mrpl55Q9CZ83 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Mrpl55Q9CZ83 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mrpl55Q9CZ83 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mrpl55Q9CZ83 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.11□□□□□ -0.15
Mrpl55Q9CZ83 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC14.11□□□□□ -0.15
Mrpl55Q9CZ83 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mrpl55Q9CZ83 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mrpl55Q9CZ83 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mrpl55Q9CZ83 Gm9806-201ENSMUST00000051080 552 ntBASIC14.11□□□□□ -0.15
Mrpl55Q9CZ83 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.11□□□□□ -0.15
Mrpl55Q9CZ83 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mrpl55Q9CZ83 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mrpl55Q9CZ83 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Mrpl55Q9CZ83 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mrpl55Q9CZ83 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mrpl55Q9CZ83 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mrpl55Q9CZ83 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mrpl55Q9CZ83 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mrpl55Q9CZ83 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Mrpl55Q9CZ83 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mrpl55Q9CZ83 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mrpl55Q9CZ83 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Mrpl55Q9CZ83 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mrpl55Q9CZ83 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Mrpl55Q9CZ83 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mrpl55Q9CZ83 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mrpl55Q9CZ83 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mrpl55Q9CZ83 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.09□□□□□ -0.15
Mrpl55Q9CZ83 Gm13889-201ENSMUST00000099689 1386 ntBASIC14.09□□□□□ -0.15
Mrpl55Q9CZ83 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Mrpl55Q9CZ83 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mrpl55Q9CZ83 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Mrpl55Q9CZ83 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Mrpl55Q9CZ83 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.08□□□□□ -0.15
Mrpl55Q9CZ83 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Mrpl55Q9CZ83 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mrpl55Q9CZ83 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mrpl55Q9CZ83 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Mrpl55Q9CZ83 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mrpl55Q9CZ83 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Mrpl55Q9CZ83 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 119.9 ms