Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rpl39lQ9CQD0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl39lQ9CQD0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpl39lQ9CQD0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rpl39lQ9CQD0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl39lQ9CQD0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl39lQ9CQD0 AC157572.2-201ENSMUST00000226970 908 ntBASIC14.2□□□□□ -0.14
Rpl39lQ9CQD0 Gm4419-202ENSMUST00000226239 1431 ntBASIC14.2□□□□□ -0.14
Rpl39lQ9CQD0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl39lQ9CQD0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl39lQ9CQD0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rpl39lQ9CQD0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl39lQ9CQD0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl39lQ9CQD0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl39lQ9CQD0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl39lQ9CQD0 Gm43863-201ENSMUST00000203822 1192 ntBASIC14.19□□□□□ -0.14
Rpl39lQ9CQD0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl39lQ9CQD0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rpl39lQ9CQD0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rpl39lQ9CQD0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.19□□□□□ -0.14
Rpl39lQ9CQD0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39lQ9CQD0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39lQ9CQD0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39lQ9CQD0 Gm8109-201ENSMUST00000194076 746 ntBASIC14.18□□□□□ -0.14
Rpl39lQ9CQD0 Gm43006-201ENSMUST00000197702 1602 ntBASIC14.18□□□□□ -0.14
Rpl39lQ9CQD0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39lQ9CQD0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39lQ9CQD0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39lQ9CQD0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rpl39lQ9CQD0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39lQ9CQD0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rpl39lQ9CQD0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39lQ9CQD0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rpl39lQ9CQD0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39lQ9CQD0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39lQ9CQD0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39lQ9CQD0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39lQ9CQD0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39lQ9CQD0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Rpl39lQ9CQD0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39lQ9CQD0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39lQ9CQD0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39lQ9CQD0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39lQ9CQD0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39lQ9CQD0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39lQ9CQD0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rpl39lQ9CQD0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rpl39lQ9CQD0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rpl39lQ9CQD0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39lQ9CQD0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39lQ9CQD0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39lQ9CQD0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC14.16□□□□□ -0.14
Rpl39lQ9CQD0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rpl39lQ9CQD0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39lQ9CQD0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rpl39lQ9CQD0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl39lQ9CQD0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl39lQ9CQD0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC14.15□□□□□ -0.14
Rpl39lQ9CQD0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl39lQ9CQD0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Rpl39lQ9CQD0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpl39lQ9CQD0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl39lQ9CQD0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC14.14□□□□□ -0.15
Rpl39lQ9CQD0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl39lQ9CQD0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl39lQ9CQD0 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.14□□□□□ -0.15
Rpl39lQ9CQD0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl39lQ9CQD0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl39lQ9CQD0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl39lQ9CQD0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC14.14□□□□□ -0.15
Rpl39lQ9CQD0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.14□□□□□ -0.15
Rpl39lQ9CQD0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl39lQ9CQD0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.14□□□□□ -0.15
Rpl39lQ9CQD0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpl39lQ9CQD0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rpl39lQ9CQD0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl39lQ9CQD0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC14.13□□□□□ -0.15
Rpl39lQ9CQD0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpl39lQ9CQD0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl39lQ9CQD0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl39lQ9CQD0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.12□□□□□ -0.15
Rpl39lQ9CQD0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl39lQ9CQD0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl39lQ9CQD0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl39lQ9CQD0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC14.12□□□□□ -0.15
Rpl39lQ9CQD0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Rpl39lQ9CQD0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpl39lQ9CQD0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl39lQ9CQD0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl39lQ9CQD0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl39lQ9CQD0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl39lQ9CQD0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Rpl39lQ9CQD0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl39lQ9CQD0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl39lQ9CQD0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rpl39lQ9CQD0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl39lQ9CQD0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl39lQ9CQD0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Rpl39lQ9CQD0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rpl39lQ9CQD0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms