Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chmp1aQ921W0 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.08■□□□□ 0.65
Chmp1aQ921W0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Chmp1aQ921W0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Chmp1aQ921W0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp1aQ921W0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chmp1aQ921W0 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.08■□□□□ 0.65
Chmp1aQ921W0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Chmp1aQ921W0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp1aQ921W0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp1aQ921W0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp1aQ921W0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp1aQ921W0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.07■□□□□ 0.64
Chmp1aQ921W0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp1aQ921W0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp1aQ921W0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp1aQ921W0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Chmp1aQ921W0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Chmp1aQ921W0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp1aQ921W0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp1aQ921W0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp1aQ921W0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Chmp1aQ921W0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Chmp1aQ921W0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp1aQ921W0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Chmp1aQ921W0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp1aQ921W0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp1aQ921W0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp1aQ921W0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Chmp1aQ921W0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp1aQ921W0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Chmp1aQ921W0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp1aQ921W0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp1aQ921W0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp1aQ921W0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp1aQ921W0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.04■□□□□ 0.64
Chmp1aQ921W0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp1aQ921W0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp1aQ921W0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp1aQ921W0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.03■□□□□ 0.64
Chmp1aQ921W0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Chmp1aQ921W0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp1aQ921W0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Chmp1aQ921W0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Chmp1aQ921W0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp1aQ921W0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Chmp1aQ921W0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chmp1aQ921W0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chmp1aQ921W0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp1aQ921W0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp1aQ921W0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp1aQ921W0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp1aQ921W0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.01■□□□□ 0.63
Chmp1aQ921W0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.01■□□□□ 0.63
Chmp1aQ921W0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp1aQ921W0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp1aQ921W0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp1aQ921W0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chmp1aQ921W0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chmp1aQ921W0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp1aQ921W0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19■□□□□ 0.63
Chmp1aQ921W0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp1aQ921W0 Gm9910-201ENSMUST00000195385 1550 ntBASIC19■□□□□ 0.63
Chmp1aQ921W0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chmp1aQ921W0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Chmp1aQ921W0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Chmp1aQ921W0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp1aQ921W0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Chmp1aQ921W0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Chmp1aQ921W0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp1aQ921W0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp1aQ921W0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp1aQ921W0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp1aQ921W0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp1aQ921W0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp1aQ921W0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp1aQ921W0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.98■□□□□ 0.63
Chmp1aQ921W0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.98■□□□□ 0.63
Chmp1aQ921W0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp1aQ921W0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp1aQ921W0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp1aQ921W0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Chmp1aQ921W0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.97■□□□□ 0.63
Chmp1aQ921W0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp1aQ921W0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.97■□□□□ 0.63
Chmp1aQ921W0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp1aQ921W0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp1aQ921W0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp1aQ921W0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp1aQ921W0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp1aQ921W0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp1aQ921W0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp1aQ921W0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Chmp1aQ921W0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.96■□□□□ 0.63
Chmp1aQ921W0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.96■□□□□ 0.63
Chmp1aQ921W0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp1aQ921W0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp1aQ921W0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp1aQ921W0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp1aQ921W0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms