Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb5Q91XX5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgb5Q91XX5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.67■■□□□ 1.06
Pcdhgb5Q91XX5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
Pcdhgb5Q91XX5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb5Q91XX5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb5Q91XX5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb5Q91XX5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.66■■□□□ 1.06
Pcdhgb5Q91XX5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Pcdhgb5Q91XX5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Pcdhgb5Q91XX5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb5Q91XX5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgb5Q91XX5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhgb5Q91XX5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdhgb5Q91XX5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhgb5Q91XX5 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.65■■□□□ 1.06
Pcdhgb5Q91XX5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.65■■□□□ 1.06
Pcdhgb5Q91XX5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhgb5Q91XX5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhgb5Q91XX5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Pcdhgb5Q91XX5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhgb5Q91XX5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Pcdhgb5Q91XX5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgb5Q91XX5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Pcdhgb5Q91XX5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.63■■□□□ 1.05
Pcdhgb5Q91XX5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.63■■□□□ 1.05
Pcdhgb5Q91XX5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgb5Q91XX5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgb5Q91XX5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgb5Q91XX5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgb5Q91XX5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb5Q91XX5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
Pcdhgb5Q91XX5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb5Q91XX5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Pcdhgb5Q91XX5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb5Q91XX5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb5Q91XX5 Gm7417-201ENSMUST00000192950 473 ntBASIC21.62■■□□□ 1.05
Pcdhgb5Q91XX5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.62■■□□□ 1.05
Pcdhgb5Q91XX5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb5Q91XX5 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.61■■□□□ 1.05
Pcdhgb5Q91XX5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhgb5Q91XX5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdhgb5Q91XX5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhgb5Q91XX5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.61■■□□□ 1.05
Pcdhgb5Q91XX5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdhgb5Q91XX5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgb5Q91XX5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgb5Q91XX5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgb5Q91XX5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.6■■□□□ 1.05
Pcdhgb5Q91XX5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgb5Q91XX5 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgb5Q91XX5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgb5Q91XX5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgb5Q91XX5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgb5Q91XX5 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.59■■□□□ 1.05
Pcdhgb5Q91XX5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgb5Q91XX5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgb5Q91XX5 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Pcdhgb5Q91XX5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Pcdhgb5Q91XX5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgb5Q91XX5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.58■■□□□ 1.05
Pcdhgb5Q91XX5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgb5Q91XX5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhgb5Q91XX5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhgb5Q91XX5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Pcdhgb5Q91XX5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb5Q91XX5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.57■■□□□ 1.04
Pcdhgb5Q91XX5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb5Q91XX5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb5Q91XX5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb5Q91XX5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb5Q91XX5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb5Q91XX5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.56■■□□□ 1.04
Pcdhgb5Q91XX5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb5Q91XX5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb5Q91XX5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhgb5Q91XX5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgb5Q91XX5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhgb5Q91XX5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgb5Q91XX5 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgb5Q91XX5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgb5Q91XX5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgb5Q91XX5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.54■■□□□ 1.04
Pcdhgb5Q91XX5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcdhgb5Q91XX5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgb5Q91XX5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgb5Q91XX5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgb5Q91XX5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhgb5Q91XX5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgb5Q91XX5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgb5Q91XX5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.53■■□□□ 1.04
Pcdhgb5Q91XX5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgb5Q91XX5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgb5Q91XX5 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Pcdhgb5Q91XX5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhgb5Q91XX5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhgb5Q91XX5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.52■■□□□ 1.04
Pcdhgb5Q91XX5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.52■■□□□ 1.04
Pcdhgb5Q91XX5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhgb5Q91XX5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms